I'll double check everything on my laptop momentarily; everything was working fine until this morning which actually suggests a system error on my end.
@hegyak: Megaman X3 for both Saturn and PSX, X4 for Saturn, and Civ II for PSX. I'll reboot and run the laundry list of tests.
E: Tested from 1.9.4 onward, clean folders for all tests.
Cues - 1.9.4 - 1.10.0 - 1.11.0 - 1.11.1
PSX
Civilization II - Loaded - Loaded - Index Out Of Range - Index Out Of Range
Final Fantasy Tactics - Loaded - Loaded - Index Out Of Range - Index Out Of Range
Rockman X3 - Loaded - Loaded - Loaded - Loaded
Tetris Plus - Loaded - Loaded - Index Out Of Range - Index Out Of Range
SATURN
Magic Knight Rayearth - Loaded - Loaded - Index Out Of Range - Index Out Of Range
Megaman X3 - Loaded - Loaded - Index Out Of Range - Index Out Of Range
Megaman X4 - Loaded - Loaded - Index Out Of Range - Index Out Of Range
Twinkle Star Sprites - Loaded - Loaded - Index Out Of Range - Index Out Of Range
So it may very well be that the cores are barfing when they get a dump that doesn't validate.
I'll check my dumps against the Verified Good Dump List and see what mismatched. Redumping solved my problem. Not sure what caused the Index Out Of Range stuff but I'll keep an eye open for it happening again.